WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25B8.6.1 Sequence Name  C25B8.6.1
Length (nt)  1682   Chromosome Location  X: 6636561-6640620
Chromosome . Primary Identifier  X Chromosome Location . Start  6636561
Chromosome Location . End  6640620 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25B8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003710 nhr-120 C25B8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25B8.6 C25B8.6 1434   X: 6636809-6636886

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25B8.6.1 6636561 6640620 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237334   326   X: 6636561-6636886 Caenorhabditis elegans
Exon237335   188   X: 6636939-6637126 Caenorhabditis elegans
Exon237336   128   X: 6637170-6637297 Caenorhabditis elegans
Exon237337   152   X: 6637341-6637492 Caenorhabditis elegans
Exon237338   120   X: 6637548-6637667 Caenorhabditis elegans
Exon237339   126   X: 6637712-6637837 Caenorhabditis elegans
Exon237340   230   X: 6637884-6638113 Caenorhabditis elegans
Exon237341   121   X: 6638891-6639011 Caenorhabditis elegans
Exon237342   186   X: 6639315-6639500 Caenorhabditis elegans
Exon237343   105   X: 6640516-6640620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25B8.6.1 6636561 6640620 -1

1 Sequence

Length
1682

1 Sequence Ontology Term

Identifier Name Description
transcript