WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56E10.3b.1 Sequence Name  C56E10.3b.1
Length (nt)  1587   Chromosome Location  X: 6647078-6651697
Chromosome . Primary Identifier  X Chromosome Location . Start  6647078
Chromosome Location . End  6651697 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56E10.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016976 C56E10.3 C56E10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56E10.3b C56E10.3b 1587   X: 6647078-6647183

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56E10.3b.1 6647078 6651697 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237327   106   X: 6647078-6647183 Caenorhabditis elegans
Exon237329   110   X: 6647440-6647549 Caenorhabditis elegans
Exon237331   76   X: 6647943-6648018 Caenorhabditis elegans
Exon237333   101   X: 6648141-6648241 Caenorhabditis elegans
Exon237335   150   X: 6648523-6648672 Caenorhabditis elegans
Exon237337   107   X: 6648728-6648834 Caenorhabditis elegans
Exon237339   103   X: 6648879-6648981 Caenorhabditis elegans
Exon237341   114   X: 6649027-6649140 Caenorhabditis elegans
Exon237343   138   X: 6649505-6649642 Caenorhabditis elegans
Exon237345   129   X: 6650545-6650673 Caenorhabditis elegans
Exon237347   171   X: 6650727-6650897 Caenorhabditis elegans
Exon237349   151   X: 6651369-6651519 Caenorhabditis elegans
Exon237350   131   X: 6651567-6651697 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56E10.3b.1 6647078 6651697 1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript