WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56E10.4c.1 Sequence Name  C56E10.4c.1
Length (nt)  891   Chromosome Location  X: 6661910-6665428
Chromosome . Primary Identifier  X Chromosome Location . Start  6661910
Chromosome Location . End  6665428 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56E10.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003727 nhr-137 C56E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56E10.4c C56E10.4c 891   X: 6661910-6662001

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56E10.4c.1 6661910 6665428 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237366   92   X: 6661910-6662001 Caenorhabditis elegans
Exon237369   78   X: 6662053-6662130 Caenorhabditis elegans
Exon237372   96   X: 6662178-6662273 Caenorhabditis elegans
Exon237375   122   X: 6662385-6662506 Caenorhabditis elegans
Exon237378   128   X: 6662666-6662793 Caenorhabditis elegans
Exon237381   114   X: 6663404-6663517 Caenorhabditis elegans
Exon237384   91   X: 6663614-6663704 Caenorhabditis elegans
Exon237387   80   X: 6664035-6664114 Caenorhabditis elegans
Exon237390   77   X: 6665117-6665193 Caenorhabditis elegans
Exon237391   13   X: 6665416-6665428 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56E10.4c.1 6661910 6665428 -1

1 Sequence

Length
891

1 Sequence Ontology Term

Identifier Name Description
transcript