WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11G12.2.1 Sequence Name  K11G12.2.1
Length (nt)  2037   Chromosome Location  X: 6702549-6709308
Chromosome . Primary Identifier  X Chromosome Location . Start  6702549
Chromosome Location . End  6709308 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11G12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000042 acr-2 K11G12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11G12.2 K11G12.2 1728   X: 6702692-6702842

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.2.1 6702549 6709308 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237512   294   X: 6702549-6702842 Caenorhabditis elegans
Exon237514   237   X: 6704421-6704657 Caenorhabditis elegans
Exon237515   67   X: 6705103-6705169 Caenorhabditis elegans
Exon237517   117   X: 6706913-6707029 Caenorhabditis elegans
Exon237518   143   X: 6707190-6707332 Caenorhabditis elegans
Exon237519   73   X: 6707378-6707450 Caenorhabditis elegans
Exon237520   160   X: 6707499-6707658 Caenorhabditis elegans
Exon237521   81   X: 6707712-6707792 Caenorhabditis elegans
Exon237522   184   X: 6707849-6708032 Caenorhabditis elegans
Exon237523   170   X: 6708496-6708665 Caenorhabditis elegans
Exon237524   156   X: 6708710-6708865 Caenorhabditis elegans
Exon237525   103   X: 6708911-6709013 Caenorhabditis elegans
Exon237526   252   X: 6709057-6709308 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.2.1 6702549 6709308 1

1 Sequence

Length
2037

1 Sequence Ontology Term

Identifier Name Description
transcript