WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11G12.1a.1 Sequence Name  K11G12.1a.1
Length (nt)  1778   Chromosome Location  X: 6713577-6716357
Chromosome . Primary Identifier  X Chromosome Location . Start  6713577
Chromosome Location . End  6716357 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11G12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003530 nas-11 K11G12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11G12.1a K11G12.1a 1740   X: 6713578-6713862

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.1a.1 6713577 6716357 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237521   286   X: 6713577-6713862 Caenorhabditis elegans
Exon237523   188   X: 6713907-6714094 Caenorhabditis elegans
Exon237525   112   X: 6714143-6714254 Caenorhabditis elegans
Exon237527   75   X: 6714302-6714376 Caenorhabditis elegans
Exon237529   323   X: 6714424-6714746 Caenorhabditis elegans
Exon237531   83   X: 6715295-6715377 Caenorhabditis elegans
Exon237533   133   X: 6715424-6715556 Caenorhabditis elegans
Exon237535   70   X: 6715647-6715716 Caenorhabditis elegans
Exon237536   158   X: 6715763-6715920 Caenorhabditis elegans
Exon237538   185   X: 6715964-6716148 Caenorhabditis elegans
Exon237541   165   X: 6716193-6716357 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.1a.1 6713577 6716357 1

1 Sequence

Length
1778

1 Sequence Ontology Term

Identifier Name Description
transcript