WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11G12.4a.1 Sequence Name  K11G12.4a.1
Length (nt)  1843   Chromosome Location  X: 6719669-6723066
Chromosome . Primary Identifier  X Chromosome Location . Start  6719669
Chromosome Location . End  6723066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11G12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004876 smf-1 K11G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11G12.4a K11G12.4a 1689   X: 6719800-6719943

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.4a.1 6719669 6723066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237574   275   X: 6719669-6719943 Caenorhabditis elegans
Exon237576   160   X: 6720170-6720329 Caenorhabditis elegans
Exon237578   112   X: 6720377-6720488 Caenorhabditis elegans
Exon237581   238   X: 6720557-6720794 Caenorhabditis elegans
Exon237582   87   X: 6720842-6720928 Caenorhabditis elegans
Exon237583   159   X: 6720973-6721131 Caenorhabditis elegans
Exon237585   156   X: 6721686-6721841 Caenorhabditis elegans
Exon237587   139   X: 6721890-6722028 Caenorhabditis elegans
Exon237589   131   X: 6722074-6722204 Caenorhabditis elegans
Exon237591   222   X: 6722252-6722473 Caenorhabditis elegans
Exon237594   164   X: 6722903-6723066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.4a.1 6719669 6723066 -1

1 Sequence

Length
1843

1 Sequence Ontology Term

Identifier Name Description
transcript