WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11G12.4a.1 Sequence Name  K11G12.4a.1
Length (nt)  1843   Chromosome Location  X: 6719669-6723066
Chromosome . Primary Identifier  X Chromosome Location . Start  6719669
Chromosome Location . End  6723066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11G12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004876 smf-1 K11G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11G12.4a K11G12.4a 1689   X: 6719800-6719943

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.4a.1 6719669 6723066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237554   275   X: 6719669-6719943 Caenorhabditis elegans
Exon237556   160   X: 6720170-6720329 Caenorhabditis elegans
Exon237558   112   X: 6720377-6720488 Caenorhabditis elegans
Exon237561   238   X: 6720557-6720794 Caenorhabditis elegans
Exon237562   87   X: 6720842-6720928 Caenorhabditis elegans
Exon237563   159   X: 6720973-6721131 Caenorhabditis elegans
Exon237565   156   X: 6721686-6721841 Caenorhabditis elegans
Exon237567   139   X: 6721890-6722028 Caenorhabditis elegans
Exon237569   131   X: 6722074-6722204 Caenorhabditis elegans
Exon237571   222   X: 6722252-6722473 Caenorhabditis elegans
Exon237574   164   X: 6722903-6723066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.4a.1 6719669 6723066 -1

1 Sequence

Length
1843

1 Sequence Ontology Term

Identifier Name Description
transcript