WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03E9.2.1 Sequence Name  R03E9.2.1
Length (nt)  2116   Chromosome Location  X: 6729998-6733301
Chromosome . Primary Identifier  X Chromosome Location . Start  6729998
Chromosome Location . End  6733301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019843 R03E9.2 R03E9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03E9.2 R03E9.2 1860   X: 6730196-6730486

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03E9.2.1 6729998 6733301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237601   489   X: 6729998-6730486 Caenorhabditis elegans
Exon237602   108   X: 6730536-6730643 Caenorhabditis elegans
Exon237603   336   X: 6731044-6731379 Caenorhabditis elegans
Exon237604   132   X: 6731447-6731578 Caenorhabditis elegans
Exon237605   225   X: 6731828-6732052 Caenorhabditis elegans
Exon237606   99   X: 6732098-6732196 Caenorhabditis elegans
Exon237607   77   X: 6732241-6732317 Caenorhabditis elegans
Exon237608   126   X: 6732362-6732487 Caenorhabditis elegans
Exon237609   79   X: 6732542-6732620 Caenorhabditis elegans
Exon237610   102   X: 6732670-6732771 Caenorhabditis elegans
Exon237611   122   X: 6732848-6732969 Caenorhabditis elegans
Exon237612   79   X: 6733016-6733094 Caenorhabditis elegans
Exon237613   142   X: 6733160-6733301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03E9.2.1 6729998 6733301 -1

1 Sequence

Length
2116

1 Sequence Ontology Term

Identifier Name Description
transcript