WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03E9.4.1 Sequence Name  R03E9.4.1
Length (nt)  2425   Chromosome Location  X: 6765970-6778114
Chromosome . Primary Identifier  X Chromosome Location . Start  6765970
Chromosome Location . End  6778114 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002149 irk-1 R03E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03E9.4 R03E9.4 1635   X: 6766579-6766714

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03E9.4.1 6765970 6778114 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237698   745   X: 6765970-6766714 Caenorhabditis elegans
Exon237699   122   X: 6767262-6767383 Caenorhabditis elegans
Exon237701   180   X: 6767487-6767666 Caenorhabditis elegans
Exon237703   315   X: 6767717-6768031 Caenorhabditis elegans
Exon237705   69   X: 6768492-6768560 Caenorhabditis elegans
Exon237707   136   X: 6768649-6768784 Caenorhabditis elegans
Exon237709   144   X: 6768840-6768983 Caenorhabditis elegans
Exon237711   165   X: 6769174-6769338 Caenorhabditis elegans
Exon237713   75   X: 6769390-6769464 Caenorhabditis elegans
Exon237715   157   X: 6769803-6769959 Caenorhabditis elegans
Exon237717   140   X: 6772805-6772944 Caenorhabditis elegans
Exon237721   177   X: 6777938-6778114 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03E9.4.1 6765970 6778114 -1

1 Sequence

Length
2425

1 Sequence Ontology Term

Identifier Name Description
transcript