WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H22K11.2.1 Sequence Name  H22K11.2.1
Length (nt)  1993   Chromosome Location  X: 6784411-6787305
Chromosome . Primary Identifier  X Chromosome Location . Start  6784411
Chromosome Location . End  6787305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H22K11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019225 bgal-2 H22K11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H22K11.2 H22K11.2 1929   X: 6784434-6784489

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H22K11.2.1 6784411 6787305 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237735   79   X: 6784411-6784489 Caenorhabditis elegans
Exon237736   296   X: 6784537-6784832 Caenorhabditis elegans
Exon237737   94   X: 6785097-6785190 Caenorhabditis elegans
Exon237738   332   X: 6785244-6785575 Caenorhabditis elegans
Exon237739   105   X: 6785621-6785725 Caenorhabditis elegans
Exon237740   380   X: 6785767-6786146 Caenorhabditis elegans
Exon237741   78   X: 6786193-6786270 Caenorhabditis elegans
Exon237742   138   X: 6786537-6786674 Caenorhabditis elegans
Exon237743   144   X: 6786720-6786863 Caenorhabditis elegans
Exon237744   165   X: 6786911-6787075 Caenorhabditis elegans
Exon237745   182   X: 6787124-6787305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H22K11.2.1 6784411 6787305 1

1 Sequence

Length
1993

1 Sequence Ontology Term

Identifier Name Description
transcript