WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H22K11.4b Sequence Name  H22K11.4b
Length (nt)  1047   Chromosome Location  X: 6787303-6787466
Chromosome . Primary Identifier  X Chromosome Location . Start  6787303
Chromosome Location . End  6787466
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H22K11.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40082 SGCA-1, isoform b 39.2 348 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00016297

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H22K11.4b 6787303 6787466 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019227 sgca-1 H22K11.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:H22K11.4b 6787303 6787466 -1
CDS:H22K11.4b 6787513 6787718 -1
CDS:H22K11.4b 6787777 6787955 -1
CDS:H22K11.4b 6788365 6788454 -1
CDS:H22K11.4b 6788512 6788674 -1
CDS:H22K11.4b 6788718 6788841 -1
CDS:H22K11.4b 6788892 6788984 -1
CDS:H22K11.4b 6789041 6789068 -1

1 Sequence

Length
1047

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H22K11.4b.1 H22K11.4b.1 1047   X: 6787303-6789068