WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03A8.2.2 Sequence Name  M03A8.2.2
Length (nt)  7546   Chromosome Location  X: 6806763-6817266
Chromosome . Primary Identifier  X Chromosome Location . Start  6806763
Chromosome Location . End  6817266 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03A8.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019748 atg-2 M03A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03A8.2 M03A8.2 6873   X: 6809104-6809256

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03A8.2.2 6806763 6817266 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237789   96   X: 6806763-6806858 Caenorhabditis elegans
Exon237792   161   X: 6809096-6809256 Caenorhabditis elegans
Exon237794   184   X: 6809304-6809487 Caenorhabditis elegans
Exon237796   387   X: 6809540-6809926 Caenorhabditis elegans
Exon237798   207   X: 6810004-6810210 Caenorhabditis elegans
Exon237800   247   X: 6810268-6810514 Caenorhabditis elegans
Exon237802   242   X: 6810564-6810805 Caenorhabditis elegans
Exon237804   622   X: 6810854-6811475 Caenorhabditis elegans
Exon237806   976   X: 6811527-6812502 Caenorhabditis elegans
Exon237808   2155   X: 6812550-6814704 Caenorhabditis elegans
Exon237810   99   X: 6814753-6814851 Caenorhabditis elegans
Exon237812   59   X: 6814905-6814963 Caenorhabditis elegans
Exon237814   576   X: 6815009-6815584 Caenorhabditis elegans
Exon237816   723   X: 6815637-6816359 Caenorhabditis elegans
Exon237818   812   X: 6816455-6817266 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03A8.2.2 6806763 6817266 1

1 Sequence

Length
7546

1 Sequence Ontology Term

Identifier Name Description
transcript