WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03A8.4.1 Sequence Name  M03A8.4.1
Length (nt)  1448   Chromosome Location  X: 6820005-6823268
Chromosome . Primary Identifier  X Chromosome Location . Start  6820005
Chromosome Location . End  6823268 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03A8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001572 gei-15 M03A8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03A8.4 M03A8.4 1230   X: 6820201-6820276

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03A8.4.1 6820005 6823268 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237845   272   X: 6820005-6820276 Caenorhabditis elegans
Exon237846   115   X: 6820323-6820437 Caenorhabditis elegans
Exon237847   86   X: 6820487-6820572 Caenorhabditis elegans
Exon237848   199   X: 6820745-6820943 Caenorhabditis elegans
Exon237849   108   X: 6821113-6821220 Caenorhabditis elegans
Exon237850   177   X: 6821364-6821540 Caenorhabditis elegans
Exon237851   116   X: 6821589-6821704 Caenorhabditis elegans
Exon237852   107   X: 6822233-6822339 Caenorhabditis elegans
Exon237853   159   X: 6822386-6822544 Caenorhabditis elegans
Exon237854   109   X: 6823160-6823268 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03A8.4.1 6820005 6823268 -1

1 Sequence

Length
1448

1 Sequence Ontology Term

Identifier Name Description
transcript