WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41B4.4a.1 Sequence Name  F41B4.4a.1
Length (nt)  2850   Chromosome Location  X: 6836210-6840720
Chromosome . Primary Identifier  X Chromosome Location . Start  6836210
Chromosome Location . End  6840720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41B4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001617 glr-6 F41B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41B4.4a F41B4.4a 2535   X: 6836420-6836651

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41B4.4a.1 6836210 6840720 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237848   442   X: 6836210-6836651 Caenorhabditis elegans
Exon237850   219   X: 6836698-6836916 Caenorhabditis elegans
Exon237852   188   X: 6836973-6837160 Caenorhabditis elegans
Exon237854   106   X: 6837208-6837313 Caenorhabditis elegans
Exon237856   177   X: 6837357-6837533 Caenorhabditis elegans
Exon237858   494   X: 6837990-6838483 Caenorhabditis elegans
Exon237859   105   X: 6838531-6838635 Caenorhabditis elegans
Exon237861   117   X: 6839026-6839142 Caenorhabditis elegans
Exon237863   295   X: 6839194-6839488 Caenorhabditis elegans
Exon237864   237   X: 6839852-6840088 Caenorhabditis elegans
Exon237865   136   X: 6840161-6840296 Caenorhabditis elegans
Exon237866   162   X: 6840344-6840505 Caenorhabditis elegans
Exon237867   172   X: 6840549-6840720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41B4.4a.1 6836210 6840720 -1

1 Sequence

Length
2850

1 Sequence Ontology Term

Identifier Name Description
transcript