WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41B4.4b.1 Sequence Name  F41B4.4b.1
Length (nt)  2143   Chromosome Location  X: 6836380-6839151
Chromosome . Primary Identifier  X Chromosome Location . Start  6836380
Chromosome Location . End  6839151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41B4.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001617 glr-6 F41B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41B4.4b F41B4.4b 987   X: 6836420-6836651

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41B4.4b.1 6836380 6839151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237849   272   X: 6836380-6836651 Caenorhabditis elegans
Exon237851   219   X: 6836698-6836916 Caenorhabditis elegans
Exon237853   188   X: 6836973-6837160 Caenorhabditis elegans
Exon237855   106   X: 6837208-6837313 Caenorhabditis elegans
Exon237857   1127   X: 6837357-6838483 Caenorhabditis elegans
Exon237860   105   X: 6838531-6838635 Caenorhabditis elegans
Exon237862   126   X: 6839026-6839151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41B4.4b.1 6836380 6839151 -1

1 Sequence

Length
2143

1 Sequence Ontology Term

Identifier Name Description
transcript