WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53B7.3a.1 Sequence Name  C53B7.3a.1
Length (nt)  821   Chromosome Location  X: 6844755-6845975
Chromosome . Primary Identifier  X Chromosome Location . Start  6844755
Chromosome Location . End  6845975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016894 C53B7.3 C53B7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B7.3a C53B7.3a 732   X: 6844769-6844792

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53B7.3a.1 6844755 6845975 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237875   38   X: 6844755-6844792 Caenorhabditis elegans
Exon237876   61   X: 6844839-6844899 Caenorhabditis elegans
Exon237879   285   X: 6844992-6845276 Caenorhabditis elegans
Exon237883   120   X: 6845336-6845455 Caenorhabditis elegans
Exon237889   317   X: 6845659-6845975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53B7.3a.1 6844755 6845975 1

1 Sequence

Length
821

1 Sequence Ontology Term

Identifier Name Description
transcript