WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41C6.5.1 Sequence Name  F41C6.5.1
Length (nt)  1119   Chromosome Location  X: 6875169-6877536
Chromosome . Primary Identifier  X Chromosome Location . Start  6875169
Chromosome Location . End  6877536 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41C6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000746 col-173 F41C6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41C6.5 F41C6.5 978   X: 6875308-6875610

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41C6.5.1 6875169 6877536 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237933   442   X: 6875169-6875610 Caenorhabditis elegans
Exon237934   290   X: 6875658-6875947 Caenorhabditis elegans
Exon237935   199   X: 6875994-6876192 Caenorhabditis elegans
Exon237936   113   X: 6877295-6877407 Caenorhabditis elegans
Exon237937   75   X: 6877462-6877536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41C6.5.1 6875169 6877536 -1

1 Sequence

Length
1119

1 Sequence Ontology Term

Identifier Name Description
transcript