WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41C6.1.1 Sequence Name  F41C6.1.1
Length (nt)  2424   Chromosome Location  X: 6889674-6897147
Chromosome . Primary Identifier  X Chromosome Location . Start  6889674
Chromosome Location . End  6897147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41C6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006746 unc-6 F41C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41C6.1 F41C6.1 1839   X: 6889740-6889817

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41C6.1.1 6889674 6897147 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237955   144   X: 6889674-6889817 Caenorhabditis elegans
Exon237957   140   X: 6889865-6890004 Caenorhabditis elegans
Exon237959   541   X: 6890458-6890998 Caenorhabditis elegans
Exon237961   162   X: 6891049-6891210 Caenorhabditis elegans
Exon237963   115   X: 6891293-6891407 Caenorhabditis elegans
Exon237968   70   X: 6892516-6892585 Caenorhabditis elegans
Exon237970   119   X: 6892636-6892754 Caenorhabditis elegans
Exon237974   150   X: 6894825-6894974 Caenorhabditis elegans
Exon237976   51   X: 6895180-6895230 Caenorhabditis elegans
Exon237978   69   X: 6895337-6895405 Caenorhabditis elegans
Exon237980   189   X: 6895459-6895647 Caenorhabditis elegans
Exon237982   89   X: 6895926-6896014 Caenorhabditis elegans
Exon237985   585   X: 6896563-6897147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41C6.1.1 6889674 6897147 1

1 Sequence

Length
2424

1 Sequence Ontology Term

Identifier Name Description
transcript