WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16E9.2b.3 Sequence Name  C16E9.2b.3
Length (nt)  1759   Chromosome Location  X: 6935731-6939048
Chromosome . Primary Identifier  X Chromosome Location . Start  6935731
Chromosome Location . End  6939048 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16E9.2b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015866 C16E9.2 C16E9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16E9.2b C16E9.2b 189   X: 6938501-6938615

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.2b.3 6935731 6939048 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238112   131   X: 6935731-6935861 Caenorhabditis elegans
Exon238117   90   X: 6936011-6936100 Caenorhabditis elegans
Exon238120   102   X: 6936150-6936251 Caenorhabditis elegans
Exon238124   68   X: 6936545-6936612 Caenorhabditis elegans
Exon238129   333   X: 6936662-6936994 Caenorhabditis elegans
Exon238135   324   X: 6937043-6937366 Caenorhabditis elegans
Exon238139   178   X: 6938044-6938221 Caenorhabditis elegans
Exon238144   150   X: 6938466-6938615 Caenorhabditis elegans
Exon238149   383   X: 6938666-6939048 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.2b.3 6935731 6939048 1

1 Sequence

Length
1759

1 Sequence Ontology Term

Identifier Name Description
transcript