WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16E9.2a.1 Sequence Name  C16E9.2a.1
Length (nt)  1709   Chromosome Location  X: 6935732-6939041
Chromosome . Primary Identifier  X Chromosome Location . Start  6935732
Chromosome Location . End  6939041 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16E9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015866 C16E9.2 C16E9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16E9.2a C16E9.2a 1374   X: 6935765-6935861

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.2a.1 6935732 6939041 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238113   130   X: 6935732-6935861 Caenorhabditis elegans
Exon238114   90   X: 6936011-6936100 Caenorhabditis elegans
Exon238118   102   X: 6936150-6936251 Caenorhabditis elegans
Exon238122   68   X: 6936545-6936612 Caenorhabditis elegans
Exon238126   111   X: 6936662-6936772 Caenorhabditis elegans
Exon238130   180   X: 6936815-6936994 Caenorhabditis elegans
Exon238133   324   X: 6937043-6937366 Caenorhabditis elegans
Exon238136   178   X: 6938044-6938221 Caenorhabditis elegans
Exon238141   150   X: 6938466-6938615 Caenorhabditis elegans
Exon238147   376   X: 6938666-6939041 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.2a.1 6935732 6939041 1

1 Sequence

Length
1709

1 Sequence Ontology Term

Identifier Name Description
transcript