WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16E9.1.1 Sequence Name  C16E9.1.1
Length (nt)  2007   Chromosome Location  X: 6940217-6943722
Chromosome . Primary Identifier  X Chromosome Location . Start  6940217
Chromosome Location . End  6943722 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16E9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015865 C16E9.1 C16E9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16E9.1 C16E9.1 1698   X: 6940479-6940523

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.1.1 6940217 6943722 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238150   140   X: 6940217-6940356 Caenorhabditis elegans
Exon238151   67   X: 6940457-6940523 Caenorhabditis elegans
Exon238152   186   X: 6940594-6940779 Caenorhabditis elegans
Exon238153   163   X: 6940931-6941093 Caenorhabditis elegans
Exon238154   155   X: 6941142-6941296 Caenorhabditis elegans
Exon238155   136   X: 6941339-6941474 Caenorhabditis elegans
Exon238157   121   X: 6942001-6942121 Caenorhabditis elegans
Exon238158   90   X: 6942200-6942289 Caenorhabditis elegans
Exon238159   388   X: 6942337-6942724 Caenorhabditis elegans
Exon238160   235   X: 6942775-6943009 Caenorhabditis elegans
Exon238161   326   X: 6943397-6943722 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.1.1 6940217 6943722 1

1 Sequence

Length
2007

1 Sequence Ontology Term

Identifier Name Description
transcript