WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16E9.4b.2 Sequence Name  C16E9.4b.2
Length (nt)  1387   Chromosome Location  X: 6944761-6949556
Chromosome . Primary Identifier  X Chromosome Location . Start  6944761
Chromosome Location . End  6949556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16E9.4b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002123 inx-1 C16E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16E9.4b C16E9.4b 1152   X: 6946619-6946654

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.4b.2 6944761 6949556 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238165   113   X: 6944761-6944873 Caenorhabditis elegans
Exon238174   89   X: 6945872-6945960 Caenorhabditis elegans
Exon238180   69   X: 6946586-6946654 Caenorhabditis elegans
Exon238187   99   X: 6947778-6947876 Caenorhabditis elegans
Exon238196   99   X: 6947922-6948020 Caenorhabditis elegans
Exon238205   168   X: 6948077-6948244 Caenorhabditis elegans
Exon238214   237   X: 6948289-6948525 Caenorhabditis elegans
Exon238223   125   X: 6948574-6948698 Caenorhabditis elegans
Exon238233   110   X: 6949055-6949164 Caenorhabditis elegans
Exon238242   136   X: 6949211-6949346 Caenorhabditis elegans
Exon238247   142   X: 6949415-6949556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.4b.2 6944761 6949556 -1

1 Sequence

Length
1387

1 Sequence Ontology Term

Identifier Name Description
transcript