WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16E9.4b.1 Sequence Name  C16E9.4b.1
Length (nt)  1507   Chromosome Location  X: 6946475-6956399
Chromosome . Primary Identifier  X Chromosome Location . Start  6946475
Chromosome Location . End  6956399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16E9.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002123 inx-1 C16E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16E9.4b C16E9.4b 1152   X: 6946619-6946654

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.4b.1 6946475 6956399 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238179   180   X: 6946475-6946654 Caenorhabditis elegans
Exon238186   99   X: 6947778-6947876 Caenorhabditis elegans
Exon238195   99   X: 6947922-6948020 Caenorhabditis elegans
Exon238204   168   X: 6948077-6948244 Caenorhabditis elegans
Exon238213   237   X: 6948289-6948525 Caenorhabditis elegans
Exon238222   125   X: 6948574-6948698 Caenorhabditis elegans
Exon238232   110   X: 6949055-6949164 Caenorhabditis elegans
Exon238241   136   X: 6949211-6949346 Caenorhabditis elegans
Exon238251   157   X: 6949415-6949571 Caenorhabditis elegans
Exon238262   120   X: 6951399-6951518 Caenorhabditis elegans
Exon238275   76   X: 6956324-6956399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16E9.4b.1 6946475 6956399 -1

1 Sequence

Length
1507

1 Sequence Ontology Term

Identifier Name Description
transcript