WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F01E11.5c Sequence Name  F01E11.5c
Length (nt)  1407   Chromosome Location  X: 6997087-6997167
Chromosome . Primary Identifier  X Chromosome Location . Start  6997087
Chromosome Location . End  6997167
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01E11.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30931 TYRA-2, isoform c 53.0 468 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000762
WBRNAi00043739
WBRNAi00072205
WBRNAi00012733
WBRNAi00030535

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F01E11.5c 6997087 6997167 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017157 tyra-2 F01E11.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F01E11.5c 6997087 6997167 -1
CDS:F01E11.5c 6997220 6997331 -1
CDS:F01E11.5c 6997379 6997510 -1
CDS:F01E11.5c 6997565 6997755 -1
CDS:F01E11.5c 6997802 6997902 -1
CDS:F01E11.5c 6998846 6998945 -1
CDS:F01E11.5c 7000653 7000670 -1
CDS:F01E11.5c 7000905 7001099 -1
CDS:F01E11.5c 7001146 7001333 -1
CDS:F01E11.5c 7001594 7001714 -1
CDS:F01E11.5c 7001763 7001876 -1
CDS:F01E11.5c 7003131 7003179 -1
CDS:F01E11.5c 7005343 7005347 -1

1 Sequence

Length
1407

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F01E11.5c.1 F01E11.5c.1 1407   X: 6997087-7005347