WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R173.3.1 Sequence Name  R173.3.1
Length (nt)  2326   Chromosome Location  X: 7030239-7036037
Chromosome . Primary Identifier  X Chromosome Location . Start  7030239
Chromosome Location . End  7036037 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R173.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020125 cest-19 R173.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R173.3 R173.3 1824   X: 7030741-7030845

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R173.3.1 7030239 7036037 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238391   607   X: 7030239-7030845 Caenorhabditis elegans
Exon238392   120   X: 7031222-7031341 Caenorhabditis elegans
Exon238393   100   X: 7031518-7031617 Caenorhabditis elegans
Exon238394   142   X: 7031664-7031805 Caenorhabditis elegans
Exon238395   124   X: 7031861-7031984 Caenorhabditis elegans
Exon238397   197   X: 7032036-7032232 Caenorhabditis elegans
Exon238398   151   X: 7032276-7032426 Caenorhabditis elegans
Exon238399   70   X: 7032500-7032569 Caenorhabditis elegans
Exon238400   109   X: 7032615-7032723 Caenorhabditis elegans
Exon238401   106   X: 7033390-7033495 Caenorhabditis elegans
Exon238402   120   X: 7033540-7033659 Caenorhabditis elegans
Exon238405   120   X: 7034256-7034375 Caenorhabditis elegans
Exon238406   109   X: 7034563-7034671 Caenorhabditis elegans
Exon238407   53   X: 7035682-7035734 Caenorhabditis elegans
Exon238408   78   X: 7035790-7035867 Caenorhabditis elegans
Exon238409   120   X: 7035918-7036037 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R173.3.1 7030239 7036037 -1

1 Sequence

Length
2326

1 Sequence Ontology Term

Identifier Name Description
transcript