WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0403.4.1 Sequence Name  B0403.4.1
Length (nt)  1643   Chromosome Location  X: 7066342-7068563
Chromosome . Primary Identifier  X Chromosome Location . Start  7066342
Chromosome Location . End  7068563 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0403.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015168 pdi-6 B0403.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0403.4 B0403.4 1323   X: 7066539-7066854

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0403.4.1 7066342 7068563 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238448   513   X: 7066342-7066854 Caenorhabditis elegans
Exon238449   664   X: 7066906-7067569 Caenorhabditis elegans
Exon238451   309   X: 7067992-7068300 Caenorhabditis elegans
Exon238452   157   X: 7068407-7068563 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0403.4.1 7066342 7068563 -1

1 Sequence

Length
1643

1 Sequence Ontology Term

Identifier Name Description
transcript