WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B7.5a.1 Sequence Name  C36B7.5a.1
Length (nt)  3478   Chromosome Location  X: 7089228-7096449
Chromosome . Primary Identifier  X Chromosome Location . Start  7089228
Chromosome Location . End  7096449 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016468 C36B7.5 C36B7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B7.5a C36B7.5a 3366   X: 7089228-7089351

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C36B7.5a.1 7089228 7096449 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238466   124   X: 7089228-7089351 Caenorhabditis elegans
Exon238467   89   X: 7089395-7089483 Caenorhabditis elegans
Exon238469   117   X: 7089580-7089696 Caenorhabditis elegans
Exon238471   107   X: 7089742-7089848 Caenorhabditis elegans
Exon238473   88   X: 7090389-7090476 Caenorhabditis elegans
Exon238476   104   X: 7090801-7090904 Caenorhabditis elegans
Exon238478   115   X: 7091149-7091263 Caenorhabditis elegans
Exon238480   132   X: 7091311-7091442 Caenorhabditis elegans
Exon238482   270   X: 7091496-7091765 Caenorhabditis elegans
Exon238484   134   X: 7091807-7091940 Caenorhabditis elegans
Exon238486   94   X: 7091986-7092079 Caenorhabditis elegans
Exon238488   62   X: 7092124-7092185 Caenorhabditis elegans
Exon238490   227   X: 7092729-7092955 Caenorhabditis elegans
Exon238492   147   X: 7093006-7093152 Caenorhabditis elegans
Exon238494   158   X: 7093196-7093353 Caenorhabditis elegans
Exon238496   123   X: 7093746-7093868 Caenorhabditis elegans
Exon238498   117   X: 7093991-7094107 Caenorhabditis elegans
Exon238500   167   X: 7094417-7094583 Caenorhabditis elegans
Exon238502   124   X: 7094628-7094751 Caenorhabditis elegans
Exon238504   92   X: 7094801-7094892 Caenorhabditis elegans
Exon238506   277   X: 7094960-7095236 Caenorhabditis elegans
Exon238508   101   X: 7095639-7095739 Caenorhabditis elegans
Exon238510   184   X: 7095784-7095967 Caenorhabditis elegans
Exon238512   94   X: 7096017-7096110 Caenorhabditis elegans
Exon238514   64   X: 7096160-7096223 Caenorhabditis elegans
Exon238517   167   X: 7096283-7096449 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C36B7.5a.1 7089228 7096449 -1

1 Sequence

Length
3478

1 Sequence Ontology Term

Identifier Name Description
transcript