WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H5.3a.1 Sequence Name  F46H5.3a.1
Length (nt)  1375   Chromosome Location  X: 7230705-7238662
Chromosome . Primary Identifier  X Chromosome Location . Start  7230705
Chromosome Location . End  7238662 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018519 F46H5.3 F46H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H5.3a F46H5.3a 1191   X: 7230889-7231378

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.3a.1 7230705 7238662 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238837   674   X: 7230705-7231378 Caenorhabditis elegans
Exon238839   326   X: 7231431-7231756 Caenorhabditis elegans
Exon238842   207   X: 7232094-7232300 Caenorhabditis elegans
Exon238844   129   X: 7232356-7232484 Caenorhabditis elegans
Exon238847   39   X: 7238624-7238662 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.3a.1 7230705 7238662 -1

1 Sequence

Length
1375

1 Sequence Ontology Term

Identifier Name Description
transcript