WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H5.7c.1 Sequence Name  F46H5.7c.1
Length (nt)  2273   Chromosome Location  X: 7238666-7242983
Chromosome . Primary Identifier  X Chromosome Location . Start  7238666
Chromosome Location . End  7242983 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H5.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018522 F46H5.7 F46H5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H5.7c F46H5.7c 1737   X: 7239010-7239115

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.7c.1 7238666 7242983 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238849   450   X: 7238666-7239115 Caenorhabditis elegans
Exon238853   89   X: 7239163-7239251 Caenorhabditis elegans
Exon238855   160   X: 7239295-7239454 Caenorhabditis elegans
Exon238859   81   X: 7239505-7239585 Caenorhabditis elegans
Exon238860   18   X: 7239825-7239842 Caenorhabditis elegans
Exon238863   222   X: 7240087-7240308 Caenorhabditis elegans
Exon238866   222   X: 7240358-7240579 Caenorhabditis elegans
Exon238869   120   X: 7240629-7240748 Caenorhabditis elegans
Exon238872   162   X: 7240801-7240962 Caenorhabditis elegans
Exon238875   217   X: 7241021-7241237 Caenorhabditis elegans
Exon238878   93   X: 7241804-7241896 Caenorhabditis elegans
Exon238881   74   X: 7241989-7242062 Caenorhabditis elegans
Exon238884   139   X: 7242549-7242687 Caenorhabditis elegans
Exon238887   226   X: 7242758-7242983 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.7c.1 7238666 7242983 -1

1 Sequence

Length
2273

1 Sequence Ontology Term

Identifier Name Description
transcript