WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H5.7b.1 Sequence Name  F46H5.7b.1
Length (nt)  1728   Chromosome Location  X: 7239010-7242791
Chromosome . Primary Identifier  X Chromosome Location . Start  7239010
Chromosome Location . End  7242791 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H5.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018522 F46H5.7 F46H5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H5.7b F46H5.7b 1728   X: 7239010-7239115

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.7b.1 7239010 7242791 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238850   106   X: 7239010-7239115 Caenorhabditis elegans
Exon238852   89   X: 7239163-7239251 Caenorhabditis elegans
Exon238856   169   X: 7239295-7239463 Caenorhabditis elegans
Exon238858   81   X: 7239505-7239585 Caenorhabditis elegans
Exon238862   222   X: 7240087-7240308 Caenorhabditis elegans
Exon238865   222   X: 7240358-7240579 Caenorhabditis elegans
Exon238868   120   X: 7240629-7240748 Caenorhabditis elegans
Exon238871   162   X: 7240801-7240962 Caenorhabditis elegans
Exon238874   217   X: 7241021-7241237 Caenorhabditis elegans
Exon238877   93   X: 7241804-7241896 Caenorhabditis elegans
Exon238880   74   X: 7241989-7242062 Caenorhabditis elegans
Exon238883   139   X: 7242549-7242687 Caenorhabditis elegans
Exon238885   34   X: 7242758-7242791 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.7b.1 7239010 7242791 -1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
transcript