WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H5.4.1 Sequence Name  F46H5.4.1
Length (nt)  6460   Chromosome Location  X: 7245064-7254610
Chromosome . Primary Identifier  X Chromosome Location . Start  7245064
Chromosome Location . End  7254610 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018520 F46H5.4 F46H5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H5.4 F46H5.4 6057   X: 7245420-7245695

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46H5.4.1 7245064 7254610 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238888   632   X: 7245064-7245695 Caenorhabditis elegans
Exon238889   196   X: 7246344-7246539 Caenorhabditis elegans
Exon238890   96   X: 7246592-7246687 Caenorhabditis elegans
Exon238891   230   X: 7246736-7246965 Caenorhabditis elegans
Exon238892   364   X: 7247014-7247377 Caenorhabditis elegans
Exon238893   216   X: 7247432-7247647 Caenorhabditis elegans
Exon238894   206   X: 7247696-7247901 Caenorhabditis elegans
Exon238895   162   X: 7247952-7248113 Caenorhabditis elegans
Exon238896   183   X: 7248157-7248339 Caenorhabditis elegans
Exon238897   258   X: 7248557-7248814 Caenorhabditis elegans
Exon238898   159   X: 7248867-7249025 Caenorhabditis elegans
Exon238899   298   X: 7249072-7249369 Caenorhabditis elegans
Exon238900   120   X: 7249418-7249537 Caenorhabditis elegans
Exon238901   174   X: 7249591-7249764 Caenorhabditis elegans
Exon238902   272   X: 7249813-7250084 Caenorhabditis elegans
Exon238903   146   X: 7250131-7250276 Caenorhabditis elegans
Exon238904   81   X: 7250321-7250401 Caenorhabditis elegans
Exon238905   235   X: 7250565-7250799 Caenorhabditis elegans
Exon238906   291   X: 7250850-7251140 Caenorhabditis elegans
Exon238907   139   X: 7251188-7251326 Caenorhabditis elegans
Exon238908   110   X: 7251377-7251486 Caenorhabditis elegans
Exon238909   197   X: 7251531-7251727 Caenorhabditis elegans
Exon238910   204   X: 7251779-7251982 Caenorhabditis elegans
Exon238911   162   X: 7252026-7252187 Caenorhabditis elegans
Exon238912   150   X: 7252233-7252382 Caenorhabditis elegans
Exon238913   121   X: 7252430-7252550 Caenorhabditis elegans
Exon238914   61   X: 7252606-7252666 Caenorhabditis elegans
Exon238915   155   X: 7252726-7252880 Caenorhabditis elegans
Exon238916   188   X: 7252927-7253114 Caenorhabditis elegans
Exon238917   194   X: 7253179-7253372 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46H5.4.1 7245064 7254610 -1

1 Sequence

Length
6460

1 Sequence Ontology Term

Identifier Name Description
transcript