WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H5.8.1 Sequence Name  F46H5.8.1
Length (nt)  1273   Chromosome Location  X: 7258116-7260377
Chromosome . Primary Identifier  X Chromosome Location . Start  7258116
Chromosome Location . End  7260377 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018523 lact-1 F46H5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H5.8 F46H5.8 1182   X: 7258207-7258383

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.8.1 7258116 7260377 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238928   268   X: 7258116-7258383 Caenorhabditis elegans
Exon238929   222   X: 7258521-7258742 Caenorhabditis elegans
Exon238930   98   X: 7258795-7258892 Caenorhabditis elegans
Exon238931   96   X: 7258970-7259065 Caenorhabditis elegans
Exon238932   89   X: 7259111-7259199 Caenorhabditis elegans
Exon238933   134   X: 7259738-7259871 Caenorhabditis elegans
Exon238934   144   X: 7259921-7260064 Caenorhabditis elegans
Exon238935   157   X: 7260113-7260269 Caenorhabditis elegans
Exon238936   65   X: 7260313-7260377 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.8.1 7258116 7260377 -1

1 Sequence

Length
1273

1 Sequence Ontology Term

Identifier Name Description
transcript