WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H5.11.1 Sequence Name  F46H5.11.1
Length (nt)  1331   Chromosome Location  X: 7269520-7272068
Chromosome . Primary Identifier  X Chromosome Location . Start  7269520
Chromosome Location . End  7272068 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H5.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00303398 F46H5.11 F46H5.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H5.11 F46H5.11 1098   X: 7269667-7269907

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.11.1 7269520 7272068 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238977   388   X: 7269520-7269907 Caenorhabditis elegans
Exon238980   186   X: 7269962-7270147 Caenorhabditis elegans
Exon238981   148   X: 7270406-7270553 Caenorhabditis elegans
Exon238982   148   X: 7270601-7270748 Caenorhabditis elegans
Exon238983   165   X: 7270797-7270961 Caenorhabditis elegans
Exon238984   204   X: 7271005-7271208 Caenorhabditis elegans
Exon238985   92   X: 7271977-7272068 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.11.1 7269520 7272068 -1

1 Sequence

Length
1331

1 Sequence Ontology Term

Identifier Name Description
transcript