WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10A3.1c.1 Sequence Name  T10A3.1c.1
Length (nt)  4821   Chromosome Location  X: 7272317-7280301
Chromosome . Primary Identifier  X Chromosome Location . Start  7272317
Chromosome Location . End  7280301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10A3.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006750 unc-10 T10A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10A3.1c T10A3.1c 4590   X: 7272548-7272742

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1c.1 7272317 7280301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239006   426   X: 7272317-7272742 Caenorhabditis elegans
Exon239014   140   X: 7272793-7272932 Caenorhabditis elegans
Exon239020   203   X: 7272985-7273187 Caenorhabditis elegans
Exon239026   139   X: 7273237-7273375 Caenorhabditis elegans
Exon239032   230   X: 7273426-7273655 Caenorhabditis elegans
Exon239038   315   X: 7273830-7274144 Caenorhabditis elegans
Exon239042   70   X: 7274318-7274387 Caenorhabditis elegans
Exon239047   412   X: 7274543-7274954 Caenorhabditis elegans
Exon239053   144   X: 7275003-7275146 Caenorhabditis elegans
Exon239059   332   X: 7275200-7275531 Caenorhabditis elegans
Exon239065   114   X: 7275624-7275737 Caenorhabditis elegans
Exon239071   128   X: 7275784-7275911 Caenorhabditis elegans
Exon239077   124   X: 7275969-7276092 Caenorhabditis elegans
Exon239083   205   X: 7276141-7276345 Caenorhabditis elegans
Exon239087   125   X: 7276445-7276569 Caenorhabditis elegans
Exon239093   114   X: 7276615-7276728 Caenorhabditis elegans
Exon239097   179   X: 7276776-7276954 Caenorhabditis elegans
Exon239105   100   X: 7277304-7277403 Caenorhabditis elegans
Exon239111   182   X: 7277463-7277644 Caenorhabditis elegans
Exon239117   56   X: 7277692-7277747 Caenorhabditis elegans
Exon239123   89   X: 7277955-7278043 Caenorhabditis elegans
Exon239129   145   X: 7278153-7278297 Caenorhabditis elegans
Exon239135   337   X: 7278355-7278691 Caenorhabditis elegans
Exon239141   188   X: 7278805-7278992 Caenorhabditis elegans
Exon239147   71   X: 7279407-7279477 Caenorhabditis elegans
Exon239154   134   X: 7279657-7279790 Caenorhabditis elegans
Exon239160   50   X: 7279850-7279899 Caenorhabditis elegans
Exon239166   69   X: 7280233-7280301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1c.1 7272317 7280301 -1

1 Sequence

Length
4821

1 Sequence Ontology Term

Identifier Name Description
transcript