WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10A3.1d.1 Sequence Name  T10A3.1d.1
Length (nt)  4584   Chromosome Location  X: 7272548-7280301
Chromosome . Primary Identifier  X Chromosome Location . Start  7272548
Chromosome Location . End  7280301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10A3.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006750 unc-10 T10A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10A3.1d T10A3.1d 4584   X: 7272548-7272742

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1d.1 7272548 7280301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239010   195   X: 7272548-7272742 Caenorhabditis elegans
Exon239015   140   X: 7272793-7272932 Caenorhabditis elegans
Exon239021   203   X: 7272985-7273187 Caenorhabditis elegans
Exon239027   139   X: 7273237-7273375 Caenorhabditis elegans
Exon239033   230   X: 7273426-7273655 Caenorhabditis elegans
Exon239039   315   X: 7273830-7274144 Caenorhabditis elegans
Exon239043   70   X: 7274318-7274387 Caenorhabditis elegans
Exon239048   412   X: 7274543-7274954 Caenorhabditis elegans
Exon239054   144   X: 7275003-7275146 Caenorhabditis elegans
Exon239060   332   X: 7275200-7275531 Caenorhabditis elegans
Exon239066   114   X: 7275624-7275737 Caenorhabditis elegans
Exon239072   128   X: 7275784-7275911 Caenorhabditis elegans
Exon239078   124   X: 7275969-7276092 Caenorhabditis elegans
Exon239084   205   X: 7276141-7276345 Caenorhabditis elegans
Exon239088   125   X: 7276445-7276569 Caenorhabditis elegans
Exon239094   114   X: 7276615-7276728 Caenorhabditis elegans
Exon239101   173   X: 7276782-7276954 Caenorhabditis elegans
Exon239106   100   X: 7277304-7277403 Caenorhabditis elegans
Exon239112   182   X: 7277463-7277644 Caenorhabditis elegans
Exon239118   56   X: 7277692-7277747 Caenorhabditis elegans
Exon239124   89   X: 7277955-7278043 Caenorhabditis elegans
Exon239130   145   X: 7278153-7278297 Caenorhabditis elegans
Exon239136   337   X: 7278355-7278691 Caenorhabditis elegans
Exon239142   188   X: 7278805-7278992 Caenorhabditis elegans
Exon239148   71   X: 7279407-7279477 Caenorhabditis elegans
Exon239155   134   X: 7279657-7279790 Caenorhabditis elegans
Exon239161   50   X: 7279850-7279899 Caenorhabditis elegans
Exon239167   69   X: 7280233-7280301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T10A3.1d.1 7272548 7280301 -1

1 Sequence

Length
4584

1 Sequence Ontology Term

Identifier Name Description
transcript