WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03A1.2c.1 Sequence Name  K03A1.2c.1
Length (nt)  2133   Chromosome Location  X: 7292138-7296035
Chromosome . Primary Identifier  X Chromosome Location . Start  7292138
Chromosome Location . End  7296035 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03A1.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019351 lron-7 K03A1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03A1.2c K03A1.2c 1902   X: 7292138-7292476

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03A1.2c.1 7292138 7296035 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239155   339   X: 7292138-7292476 Caenorhabditis elegans
Exon239156   141   X: 7292561-7292701 Caenorhabditis elegans
Exon239159   57   X: 7292844-7292900 Caenorhabditis elegans
Exon239162   72   X: 7293730-7293801 Caenorhabditis elegans
Exon239165   117   X: 7293848-7293964 Caenorhabditis elegans
Exon239168   149   X: 7294011-7294159 Caenorhabditis elegans
Exon239171   144   X: 7294210-7294353 Caenorhabditis elegans
Exon239174   96   X: 7294397-7294492 Caenorhabditis elegans
Exon239177   93   X: 7294567-7294659 Caenorhabditis elegans
Exon239180   399   X: 7294707-7295105 Caenorhabditis elegans
Exon239183   96   X: 7295149-7295244 Caenorhabditis elegans
Exon239185   100   X: 7295326-7295425 Caenorhabditis elegans
Exon239188   330   X: 7295706-7296035 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03A1.2c.1 7292138 7296035 1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
transcript