WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08A9.9.1 Sequence Name  T08A9.9.1
Length (nt)  370   Chromosome Location  X: 7319937-7320354
Chromosome . Primary Identifier  X Chromosome Location . Start  7319937
Chromosome Location . End  7320354 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08A9.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004990 spp-5 T08A9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08A9.9 T08A9.9 312   X: 7319994-7320152

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08A9.9.1 7319937 7320354 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239227   216   X: 7319937-7320152 Caenorhabditis elegans
Exon239228   154   X: 7320201-7320354 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08A9.9.1 7319937 7320354 -1

1 Sequence

Length
370

1 Sequence Ontology Term

Identifier Name Description
transcript