WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08A9.2.1 Sequence Name  T08A9.2.1
Length (nt)  601   Chromosome Location  X: 7330949-7331839
Chromosome . Primary Identifier  X Chromosome Location . Start  7330949
Chromosome Location . End  7331839 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08A9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020335 ttr-30 T08A9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08A9.2 T08A9.2 432   X: 7331191-7331356

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08A9.2.1 7330949 7331839 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239248   59   X: 7330949-7331007 Caenorhabditis elegans
Exon239250   166   X: 7331191-7331356 Caenorhabditis elegans
Exon239251   128   X: 7331416-7331543 Caenorhabditis elegans
Exon239253   248   X: 7331592-7331839 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08A9.2.1 7330949 7331839 1

1 Sequence

Length
601

1 Sequence Ontology Term

Identifier Name Description
transcript