WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01C10.3.1 Sequence Name  C01C10.3.1
Length (nt)  1504   Chromosome Location  X: 7439400-7442577
Chromosome . Primary Identifier  X Chromosome Location . Start  7439400
Chromosome Location . End  7442577 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01C10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015295 acl-12 C01C10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01C10.3 C01C10.3 1176   X: 7439726-7439911

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01C10.3.1 7439400 7442577 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239435   512   X: 7439400-7439911 Caenorhabditis elegans
Exon239436   233   X: 7440476-7440708 Caenorhabditis elegans
Exon239437   135   X: 7440755-7440889 Caenorhabditis elegans
Exon239438   184   X: 7441136-7441319 Caenorhabditis elegans
Exon239439   131   X: 7441722-7441852 Caenorhabditis elegans
Exon239440   89   X: 7441900-7441988 Caenorhabditis elegans
Exon239441   91   X: 7442060-7442150 Caenorhabditis elegans
Exon239442   129   X: 7442449-7442577 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01C10.3.1 7439400 7442577 -1

1 Sequence

Length
1504

1 Sequence Ontology Term

Identifier Name Description
transcript