WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08A8.3a.1 Sequence Name  K08A8.3a.1
Length (nt)  2929   Chromosome Location  X: 7465193-7475018
Chromosome . Primary Identifier  X Chromosome Location . Start  7465193
Chromosome Location . End  7475018 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08A8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000591 coh-1 K08A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08A8.3a K08A8.3a 1794   X: 7466321-7466491

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08A8.3a.1 7465193 7475018 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239481   1299   X: 7465193-7466491 Caenorhabditis elegans
Exon239491   105   X: 7468098-7468202 Caenorhabditis elegans
Exon239496   201   X: 7469095-7469295 Caenorhabditis elegans
Exon239502   141   X: 7471092-7471232 Caenorhabditis elegans
Exon239503   133   X: 7471281-7471413 Caenorhabditis elegans
Exon239504   569   X: 7472720-7473288 Caenorhabditis elegans
Exon239505   150   X: 7474291-7474440 Caenorhabditis elegans
Exon239506   180   X: 7474632-7474811 Caenorhabditis elegans
Exon239507   151   X: 7474868-7475018 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08A8.3a.1 7465193 7475018 -1

1 Sequence

Length
2929

1 Sequence Ontology Term

Identifier Name Description
transcript