WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.1.1 Sequence Name  F48E3.1.1
Length (nt)  2179   Chromosome Location  X: 7485864-7490707
Chromosome . Primary Identifier  X Chromosome Location . Start  7485864
Chromosome Location . End  7490707 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001637 gly-12 F48E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.1 F48E3.1 1404   X: 7486172-7486294

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.1.1 7485864 7490707 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239534   431   X: 7485864-7486294 Caenorhabditis elegans
Exon239537   63   X: 7486347-7486409 Caenorhabditis elegans
Exon239540   95   X: 7486479-7486573 Caenorhabditis elegans
Exon239543   118   X: 7486625-7486742 Caenorhabditis elegans
Exon239546   118   X: 7486792-7486909 Caenorhabditis elegans
Exon239549   79   X: 7486973-7487051 Caenorhabditis elegans
Exon239552   264   X: 7487627-7487890 Caenorhabditis elegans
Exon239555   124   X: 7488056-7488179 Caenorhabditis elegans
Exon239558   59   X: 7488228-7488286 Caenorhabditis elegans
Exon239561   70   X: 7488327-7488396 Caenorhabditis elegans
Exon239564   185   X: 7488440-7488624 Caenorhabditis elegans
Exon239567   119   X: 7488670-7488788 Caenorhabditis elegans
Exon239570   72   X: 7489675-7489746 Caenorhabditis elegans
Exon239573   382   X: 7490326-7490707 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.1.1 7485864 7490707 1

1 Sequence

Length
2179

1 Sequence Ontology Term

Identifier Name Description
transcript