WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.1.2 Sequence Name  F48E3.1.2
Length (nt)  1787   Chromosome Location  X: 7486004-7489876
Chromosome . Primary Identifier  X Chromosome Location . Start  7486004
Chromosome Location . End  7489876 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001637 gly-12 F48E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.1 F48E3.1 1404   X: 7486172-7486294

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.1.2 7486004 7489876 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239535   291   X: 7486004-7486294 Caenorhabditis elegans
Exon239538   63   X: 7486347-7486409 Caenorhabditis elegans
Exon239541   95   X: 7486479-7486573 Caenorhabditis elegans
Exon239544   118   X: 7486625-7486742 Caenorhabditis elegans
Exon239547   118   X: 7486792-7486909 Caenorhabditis elegans
Exon239550   79   X: 7486973-7487051 Caenorhabditis elegans
Exon239553   264   X: 7487627-7487890 Caenorhabditis elegans
Exon239556   124   X: 7488056-7488179 Caenorhabditis elegans
Exon239559   59   X: 7488228-7488286 Caenorhabditis elegans
Exon239562   70   X: 7488327-7488396 Caenorhabditis elegans
Exon239565   185   X: 7488440-7488624 Caenorhabditis elegans
Exon239568   119   X: 7488670-7488788 Caenorhabditis elegans
Exon239572   202   X: 7489675-7489876 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.1.2 7486004 7489876 1

1 Sequence

Length
1787

1 Sequence Ontology Term

Identifier Name Description
transcript