WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.1.3 Sequence Name  F48E3.1.3
Length (nt)  1870   Chromosome Location  X: 7486155-7490695
Chromosome . Primary Identifier  X Chromosome Location . Start  7486155
Chromosome Location . End  7490695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.1.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001637 gly-12 F48E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.1 F48E3.1 1404   X: 7486172-7486294

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.1.3 7486155 7490695 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239536   140   X: 7486155-7486294 Caenorhabditis elegans
Exon239539   63   X: 7486347-7486409 Caenorhabditis elegans
Exon239542   95   X: 7486479-7486573 Caenorhabditis elegans
Exon239545   118   X: 7486625-7486742 Caenorhabditis elegans
Exon239548   118   X: 7486792-7486909 Caenorhabditis elegans
Exon239551   79   X: 7486973-7487051 Caenorhabditis elegans
Exon239554   264   X: 7487627-7487890 Caenorhabditis elegans
Exon239557   124   X: 7488056-7488179 Caenorhabditis elegans
Exon239560   59   X: 7488228-7488286 Caenorhabditis elegans
Exon239563   70   X: 7488327-7488396 Caenorhabditis elegans
Exon239566   185   X: 7488440-7488624 Caenorhabditis elegans
Exon239569   119   X: 7488670-7488788 Caenorhabditis elegans
Exon239571   72   X: 7489675-7489746 Caenorhabditis elegans
Exon239574   364   X: 7490332-7490695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.1.3 7486155 7490695 1

1 Sequence

Length
1870

1 Sequence Ontology Term

Identifier Name Description
transcript