WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48E3.8e Sequence Name  F48E3.8e
Length (nt)  3852   Chromosome Location  X: 7508011-7508109
Chromosome . Primary Identifier  X Chromosome Location . Start  7508011
Chromosome Location . End  7508109
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.8e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53400 CHTS-1, isoform e 140.6 1283 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00001017
WBRNAi00047746
WBRNAi00015084
WBRNAi00015252
WBRNAi00111587
WBRNAi00111589
WBRNAi00111583
WBRNAi00111585

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F48E3.8e 7508011 7508109 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018607 chts-1 F48E3.8 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:F48E3.8e 7508011 7508109 -1
CDS:F48E3.8e 7508156 7508299 -1
CDS:F48E3.8e 7508350 7508732 -1
CDS:F48E3.8e 7508789 7509171 -1
CDS:F48E3.8e 7509218 7509305 -1
CDS:F48E3.8e 7512895 7513020 -1
CDS:F48E3.8e 7513068 7513187 -1
CDS:F48E3.8e 7514249 7514413 -1
CDS:F48E3.8e 7514486 7514734 -1
CDS:F48E3.8e 7514933 7515184 -1
CDS:F48E3.8e 7515240 7515390 -1
CDS:F48E3.8e 7515438 7515808 -1
CDS:F48E3.8e 7515855 7515983 -1
CDS:F48E3.8e 7516203 7516334 -1
CDS:F48E3.8e 7516387 7516551 -1
CDS:F48E3.8e 7516606 7516782 -1
CDS:F48E3.8e 7516828 7517013 -1
CDS:F48E3.8e 7517064 7517176 -1
CDS:F48E3.8e 7517220 7517298 -1
CDS:F48E3.8e 7517348 7517416 -1
CDS:F48E3.8e 7517463 7517699 -1
CDS:F48E3.8e 7517749 7517782 -1

1 Sequence

Length
3852

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48E3.8e.1 F48E3.8e.1 3974   X: 7507889-7517782