WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48E3.8f Sequence Name  F48E3.8f
Length (nt)  6336   Chromosome Location  X: 7509447-7509553
Chromosome . Primary Identifier  X Chromosome Location . Start  7509447
Chromosome Location . End  7509553
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.8f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53470 CHTS-1, isoform f 227.2 2111 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00001017
WBRNAi00047746
WBRNAi00015084
WBRNAi00111587
WBRNAi00111589
WBRNAi00111583
WBRNAi00111585

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F48E3.8f 7509447 7509553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018607 chts-1 F48E3.8 Caenorhabditis elegans

35 Locations


Feature . Primary Identifier
Start End Strand
CDS:F48E3.8f 7509447 7509553 -1
CDS:F48E3.8f 7509599 7509730 -1
CDS:F48E3.8f 7509785 7509929 -1
CDS:F48E3.8f 7509976 7510147 -1
CDS:F48E3.8f 7510197 7510470 -1
CDS:F48E3.8f 7510517 7510654 -1
CDS:F48E3.8f 7510698 7510886 -1
CDS:F48E3.8f 7510935 7511064 -1
CDS:F48E3.8f 7511115 7511252 -1
CDS:F48E3.8f 7511299 7511574 -1
CDS:F48E3.8f 7511627 7511955 -1
CDS:F48E3.8f 7512105 7512188 -1
CDS:F48E3.8f 7512242 7512565 -1
CDS:F48E3.8f 7512611 7512796 -1
CDS:F48E3.8f 7512895 7513020 -1
CDS:F48E3.8f 7513068 7513187 -1
CDS:F48E3.8f 7513231 7513359 -1
CDS:F48E3.8f 7513408 7513803 -1
CDS:F48E3.8f 7513852 7514160 -1
CDS:F48E3.8f 7514249 7514413 -1
CDS:F48E3.8f 7514486 7514734 -1
CDS:F48E3.8f 7514933 7515184 -1
CDS:F48E3.8f 7515240 7515390 -1
CDS:F48E3.8f 7515438 7515808 -1
CDS:F48E3.8f 7515855 7515983 -1
CDS:F48E3.8f 7516031 7516153 -1
CDS:F48E3.8f 7516203 7516334 -1
CDS:F48E3.8f 7516387 7516551 -1
CDS:F48E3.8f 7516606 7516782 -1
CDS:F48E3.8f 7516828 7517013 -1

1 Sequence

Length
6336

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48E3.8f.1 F48E3.8f.1 6434   X: 7509349-7517782