WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C8.5.1 Sequence Name  F46C8.5.1
Length (nt)  1903   Chromosome Location  X: 7527769-7532732
Chromosome . Primary Identifier  X Chromosome Location . Start  7527769
Chromosome Location . End  7532732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000438 ceh-14 F46C8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C8.5 F46C8.5 1056   X: 7528616-7528782

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46C8.5.1 7527769 7532732 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239873   1014   X: 7527769-7528782 Caenorhabditis elegans
Exon239874   78   X: 7528827-7528904 Caenorhabditis elegans
Exon239875   136   X: 7528953-7529088 Caenorhabditis elegans
Exon239876   84   X: 7529139-7529222 Caenorhabditis elegans
Exon239877   83   X: 7529774-7529856 Caenorhabditis elegans
Exon239878   89   X: 7529916-7530004 Caenorhabditis elegans
Exon239879   117   X: 7530049-7530165 Caenorhabditis elegans
Exon239880   105   X: 7531231-7531335 Caenorhabditis elegans
Exon239881   91   X: 7531393-7531483 Caenorhabditis elegans
Exon239883   106   X: 7532627-7532732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46C8.5.1 7527769 7532732 -1

1 Sequence

Length
1903

1 Sequence Ontology Term

Identifier Name Description
transcript