WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C8.1.1 Sequence Name  F46C8.1.1
Length (nt)  892   Chromosome Location  X: 7548458-7551288
Chromosome . Primary Identifier  X Chromosome Location . Start  7548458
Chromosome Location . End  7551288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018484 F46C8.1 F46C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C8.1 F46C8.1 579   X: 7548661-7548726

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46C8.1.1 7548458 7551288 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239890   269   X: 7548458-7548726 Caenorhabditis elegans
Exon239891   85   X: 7548863-7548947 Caenorhabditis elegans
Exon239892   100   X: 7550328-7550427 Caenorhabditis elegans
Exon239893   110   X: 7550483-7550592 Caenorhabditis elegans
Exon239894   122   X: 7550648-7550769 Caenorhabditis elegans
Exon239895   206   X: 7551083-7551288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46C8.1.1 7548458 7551288 1

1 Sequence

Length
892

1 Sequence Ontology Term

Identifier Name Description
transcript