WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C8.8.1 Sequence Name  F46C8.8.1
Length (nt)  1091   Chromosome Location  X: 7551197-7554426
Chromosome . Primary Identifier  X Chromosome Location . Start  7551197
Chromosome Location . End  7554426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C8.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018487 F46C8.8 F46C8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C8.8 F46C8.8 909   X: 7551372-7551463

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46C8.8.1 7551197 7554426 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239896   267   X: 7551197-7551463 Caenorhabditis elegans
Exon239897   168   X: 7551507-7551674 Caenorhabditis elegans
Exon239898   78   X: 7551727-7551804 Caenorhabditis elegans
Exon239899   66   X: 7552805-7552870 Caenorhabditis elegans
Exon239900   135   X: 7552923-7553057 Caenorhabditis elegans
Exon239901   90   X: 7553120-7553209 Caenorhabditis elegans
Exon239902   96   X: 7553287-7553382 Caenorhabditis elegans
Exon239903   93   X: 7553562-7553654 Caenorhabditis elegans
Exon239904   98   X: 7554329-7554426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46C8.8.1 7551197 7554426 -1

1 Sequence

Length
1091

1 Sequence Ontology Term

Identifier Name Description
transcript