WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08C6.5.1 Sequence Name  F08C6.5.1
Length (nt)  1478   Chromosome Location  X: 7559405-7562125
Chromosome . Primary Identifier  X Chromosome Location . Start  7559405
Chromosome Location . End  7562125 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08C6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017243 F08C6.5 F08C6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08C6.5 F08C6.5 579   X: 7560130-7560237

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08C6.5.1 7559405 7562125 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239919   833   X: 7559405-7560237 Caenorhabditis elegans
Exon239920   81   X: 7560380-7560460 Caenorhabditis elegans
Exon239921   117   X: 7560509-7560625 Caenorhabditis elegans
Exon239922   151   X: 7561608-7561758 Caenorhabditis elegans
Exon239923   296   X: 7561830-7562125 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08C6.5.1 7559405 7562125 1

1 Sequence

Length
1478

1 Sequence Ontology Term

Identifier Name Description
transcript