WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08C6.2b.1 Sequence Name  F08C6.2b.1
Length (nt)  1390   Chromosome Location  X: 7578768-7581055
Chromosome . Primary Identifier  X Chromosome Location . Start  7578768
Chromosome Location . End  7581055 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08C6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017241 pcyt-1 F08C6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08C6.2b F08C6.2b 1065   X: 7578772-7578976

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08C6.2b.1 7578768 7581055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239966   209   X: 7578768-7578976 Caenorhabditis elegans
Exon239968   117   X: 7579240-7579356 Caenorhabditis elegans
Exon239970   374   X: 7579406-7579779 Caenorhabditis elegans
Exon239972   138   X: 7579826-7579963 Caenorhabditis elegans
Exon239974   552   X: 7580504-7581055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08C6.2b.1 7578768 7581055 1

1 Sequence

Length
1390

1 Sequence Ontology Term

Identifier Name Description
transcript